STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS90297.1Aminotransferase, LLPSF_NHT_00031 family; Belongs to the DegT/DnrJ/EryC1 family. (388 aa)    
Predicted Functional Partners:
SFS90283.1
NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family.
 
 
 0.960
SFS90312.1
Nucleotidyl transferase.
 
  
 0.948
SFS78804.1
NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.
 
 
 0.940
SFS90337.1
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family.
 
 
 0.914
SFS78866.1
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family.
 
 0.890
SFS70285.1
Phage transcriptional activator, RinA family.
  
 
 0.853
SFS90364.1
GDP/UDP-N,N'-diacetylbacillosamine 2-epimerase (hydrolysing).
 
  
 0.845
SFS78846.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
  
 0.837
SFS90350.1
N,N'-diacetyllegionaminate synthase.
 
  
 0.788
SFS90378.1
CMP-N,N'-diacetyllegionaminic acid synthase.
 
  
 0.706
Your Current Organism:
Halolactibacillus miurensis
NCBI taxonomy Id: 306541
Other names: DSM 17074, H. miurensis, Halolactibacillus miurensis Ishikawa et al. 2005, IAM 15247, JCM 21699, NBRC 100873, NRIC 0633, strain M23-1
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.