STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS90598.1Osmoprotectant transport system permease protein. (217 aa)    
Predicted Functional Partners:
SFS90564.1
Osmoprotectant transport system ATP-binding protein.
 0.999
SFS90586.1
Osmoprotectant transport system substrate-binding protein.
 
 0.999
SFT03780.1
Osmoprotectant transport system ATP-binding protein.
 0.998
SFS90575.1
Osmoprotectant transport system permease protein.
 
 
0.980
SFS64031.1
Glycine betaine/proline transport system ATP-binding protein.
 
 0.820
SFT03766.1
Osmoprotectant transport system permease protein.
 
 
0.820
SFS59801.1
CBS domain-containing protein.
    
  0.731
guaB
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
 
  0.702
SFS87039.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
    
  0.667
SFS87057.1
Diguanylate cyclase (GGDEF) domain-containing protein.
    
  0.667
Your Current Organism:
Halolactibacillus miurensis
NCBI taxonomy Id: 306541
Other names: DSM 17074, H. miurensis, Halolactibacillus miurensis Ishikawa et al. 2005, IAM 15247, JCM 21699, NBRC 100873, NRIC 0633, strain M23-1
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