STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT00444.1Taurine transport system permease protein. (261 aa)    
Predicted Functional Partners:
SFT00456.1
Taurine transport system substrate-binding protein.
 
 
 0.998
SFT00471.1
Taurine transport system ATP-binding protein.
 
 
 0.981
SFS91266.1
Sulfonate transport system ATP-binding protein.
 
 
 0.943
SFS91238.1
Sulfonate transport system substrate-binding protein.
 
 
 0.942
SFS34769.1
NitT/TauT family transport system ATP-binding protein.
 
 
 0.844
SFS34808.1
NitT/TauT family transport system substrate-binding protein.
 
 
 0.831
SFT00412.1
Hypothetical protein.
 
     0.746
SFS75683.1
Luciferase family oxidoreductase, group 1.
  
 
 0.610
SFT08941.1
Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase).
  
 
 0.610
SFT04224.1
Hypothetical protein.
 
     0.559
Your Current Organism:
Halolactibacillus miurensis
NCBI taxonomy Id: 306541
Other names: DSM 17074, H. miurensis, Halolactibacillus miurensis Ishikawa et al. 2005, IAM 15247, JCM 21699, NBRC 100873, NRIC 0633, strain M23-1
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