Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ASH2L | D8U149_VOLCA | D8UFI6 | D8U149 | Uncharacterized protein ASH2L. | Uncharacterized protein. | 0.674 |
ASH2L | D8UC14_VOLCA | D8UFI6 | D8UC14 | Uncharacterized protein ASH2L. | Histone H2A; Belongs to the histone H2A family. | 0.781 |
ASH2L | D8UEY9_VOLCA | D8UFI6 | D8UEY9 | Uncharacterized protein ASH2L. | WD_REPEATS_REGION domain-containing protein. | 0.998 |
ASH2L | hstH3-8 | D8UFI6 | D8THQ2 | Uncharacterized protein ASH2L. | Histone H3; Belongs to the histone H3 family. | 0.884 |
ASH2L | hstH4-13 | D8UFI6 | D8TP21 | Uncharacterized protein ASH2L. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.901 |
ASH2L | hstH4-8 | D8UFI6 | D8THQ3 | Uncharacterized protein ASH2L. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.901 |
D8TIQ7_VOLCA | D8UC14_VOLCA | D8TIQ7 | D8UC14 | Uncharacterized protein. | Histone H2A; Belongs to the histone H2A family. | 0.627 |
D8TIQ7_VOLCA | hstH3-8 | D8TIQ7 | D8THQ2 | Uncharacterized protein. | Histone H3; Belongs to the histone H3 family. | 0.958 |
D8TIQ7_VOLCA | hstH4-13 | D8TIQ7 | D8TP21 | Uncharacterized protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.828 |
D8TIQ7_VOLCA | hstH4-8 | D8TIQ7 | D8THQ3 | Uncharacterized protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.828 |
D8TKK4_VOLCA | D8U149_VOLCA | D8TKK4 | D8U149 | Uncharacterized protein. | Uncharacterized protein. | 0.425 |
D8TKK4_VOLCA | D8U648_VOLCA | D8TKK4 | D8U648 | Uncharacterized protein. | Uncharacterized protein. | 0.983 |
D8TKK4_VOLCA | D8UC14_VOLCA | D8TKK4 | D8UC14 | Uncharacterized protein. | Histone H2A; Belongs to the histone H2A family. | 0.504 |
D8TKK4_VOLCA | arp4 | D8TKK4 | D8UHX7 | Uncharacterized protein. | Actin-related protein Arp4; Belongs to the actin family. | 0.957 |
D8TKK4_VOLCA | hstH3-8 | D8TKK4 | D8THQ2 | Uncharacterized protein. | Histone H3; Belongs to the histone H3 family. | 0.820 |
D8TKK4_VOLCA | hstH4-13 | D8TKK4 | D8TP21 | Uncharacterized protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.986 |
D8TKK4_VOLCA | hstH4-8 | D8TKK4 | D8THQ3 | Uncharacterized protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.986 |
D8U149_VOLCA | ASH2L | D8U149 | D8UFI6 | Uncharacterized protein. | Uncharacterized protein ASH2L. | 0.674 |
D8U149_VOLCA | D8TKK4_VOLCA | D8U149 | D8TKK4 | Uncharacterized protein. | Uncharacterized protein. | 0.425 |
D8U149_VOLCA | D8UC14_VOLCA | D8U149 | D8UC14 | Uncharacterized protein. | Histone H2A; Belongs to the histone H2A family. | 0.411 |
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