STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8TIY2_VOLCAUncharacterized protein. (883 aa)    
Predicted Functional Partners:
D8TTE1_VOLCA
TGc domain-containing protein.
    
 
 0.935
rabL2A
Rab-related GTPase.
   
 0.593
D8TV91_VOLCA
RabA/Rab11.
   
 0.593
D8U6H8_VOLCA
Uncharacterized protein.
   
 0.478
arp2
Actin-related protein Arp2; Belongs to the actin family.
    
 0.454
D8TVH0_VOLCA
TPR_REGION domain-containing protein.
    
 0.435
D8U2V5_VOLCA
Uncharacterized protein.
    
 0.435
arp4
Actin-related protein Arp4; Belongs to the actin family.
    
 0.432
arp3
Actin-related protein Arp3; Belongs to the actin family.
   
 0.424
D8TWV9_VOLCA
Uncharacterized protein.
   
 0.424
Your Current Organism:
Volvox carteri
NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.