STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8TJQ8_VOLCAUncharacterized protein. (245 aa)    
Predicted Functional Partners:
D8TVA9_VOLCA
Uncharacterized protein.
 
 0.991
D8TJ90_VOLCA
Uncharacterized protein.
  
 0.988
D8TN51_VOLCA
S1 motif domain-containing protein.
   
 0.987
D8U6D1_VOLCA
Uncharacterized protein.
   
 0.984
D8U141_VOLCA
RNase_PH domain-containing protein.
  
0.976
D8TY61_VOLCA
KH_dom_type_1 domain-containing protein.
  
 0.975
D8UJX9_VOLCA
Uncharacterized protein.
   
 0.969
D8UH46_VOLCA
Uncharacterized protein.
   
 0.945
D8TR89_VOLCA
RNase_PH domain-containing protein.
  
 
  
0.922
D8UD65_VOLCA
Uncharacterized protein.
   
 0.915
Your Current Organism:
Volvox carteri
NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.