STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8TPC7_VOLCARab-GAP TBC domain-containing protein. (333 aa)    
Predicted Functional Partners:
D8UEN0_VOLCA
FeS_assembly_P domain-containing protein.
 
      0.530
rabH
RabH/Rab6.
    
 
 0.522
rabG
RabG/Rab7.
   
 
 0.471
mrpS9
Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
    
 
 0.434
mrpL36
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
   
   0.432
D8UIC3_VOLCA
Rab-GAP TBC domain-containing protein.
   
 
 0.430
D8TIP9_VOLCA
L51_S25_CI-B8 domain-containing protein.
    
   0.422
D8TKK3_VOLCA
Uncharacterized protein.
    
   0.422
mrpL30
Mitochondrial ribosomal protein L30; Belongs to the universal ribosomal protein uL30 family.
    
   0.422
D8TQR8_VOLCA
Uncharacterized protein.
    
   0.422
Your Current Organism:
Volvox carteri
NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar
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