STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8TQ50_VOLCASkp1_POZ domain-containing protein; Belongs to the SKP1 family. (100 aa)    
Predicted Functional Partners:
D8TGU5_VOLCA
Uncharacterized protein.
    
 0.995
D8U4T9_VOLCA
RING-type domain-containing protein.
   
 0.984
D8U1W8_VOLCA
MPN domain-containing protein.
   
 0.926
D8TIV5_VOLCA
VHL domain-containing protein.
   
 0.924
D8TK16_VOLCA
BFN domain-containing protein.
   
 0.924
vhlA
Uncharacterized protein vhlA.
   
 0.924
D8U3A7_VOLCA
PCI domain-containing protein.
    
  0.897
D8TNK5_VOLCA
Uncharacterized protein; Belongs to the SKP1 family.
   
 
 0.895
D8U8G2_VOLCA
PCI domain-containing protein.
  
  0.866
D8UEX6_VOLCA
UBX domain-containing protein.
    
 0.855
Your Current Organism:
Volvox carteri
NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.