STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8TQ61_VOLCAWD_REPEATS_REGION domain-containing protein. (1704 aa)    
Predicted Functional Partners:
fap66
Uncharacterized protein fap66.
  
 0.999
ift140
Intraflagellar transport particle protein IFT140.
  
 0.999
fap118
Flagellar associated protein FAP118.
  
0.992
D8TIT7_VOLCA
Uncharacterized protein.
  
 0.976
ift172
Intraflagellar protein IFT172.
  
 0.951
D8TVP1_VOLCA
Uncharacterized protein.
  
 0.938
ift20
Intraflagellar transport protein IFT20.
    
 0.934
ift81
Uncharacterized protein ift81.
  
 0.924
bldA
Uncharacterized protein bldA.
  
 
 0.916
D8TU46_VOLCA
Uncharacterized protein.
    
 0.905
Your Current Organism:
Volvox carteri
NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.