STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8TQH4_VOLCAUncharacterized protein. (1943 aa)    
Predicted Functional Partners:
D8TP82_VOLCA
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.747
D8TWB3_VOLCA
Uncharacterized protein.
   
 0.693
D8UJ59_VOLCA
RING-type domain-containing protein.
   
 0.693
D8TIQ7_VOLCA
Uncharacterized protein.
    
  0.676
D8TX09_VOLCA
Helicase ATP-binding domain-containing protein.
   
 0.656
rps25
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
  0.628
rpl19
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 0.627
rps21
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
  0.625
rps24
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
  0.624
rps15
Component of cytosolic 80S ribosome and 40S small subunit; Belongs to the universal ribosomal protein uS19 family.
   
 0.623
Your Current Organism:
Volvox carteri
NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar
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