Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
D8THA8_VOLCA | D8TRC4_VOLCA | D8THA8 | D8TRC4 | Uncharacterized protein. | Thioredoxin domain-containing protein. | 0.501 |
D8THA8_VOLCA | prx4 | D8THA8 | D8U4Q5 | Uncharacterized protein. | Peroxiredoxin, type II. | 0.765 |
D8THA8_VOLCA | prx5 | D8THA8 | D8UCL3 | Uncharacterized protein. | Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. | 0.765 |
D8TRC4_VOLCA | D8THA8_VOLCA | D8TRC4 | D8THA8 | Thioredoxin domain-containing protein. | Uncharacterized protein. | 0.501 |
D8TRC4_VOLCA | D8U482_VOLCA | D8TRC4 | D8U482 | Thioredoxin domain-containing protein. | Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.462 |
D8TRC4_VOLCA | D8U5K1_VOLCA | D8TRC4 | D8U5K1 | Thioredoxin domain-containing protein. | Calreticulin. | 0.494 |
D8TRC4_VOLCA | D8UAZ7_VOLCA | D8TRC4 | D8UAZ7 | Thioredoxin domain-containing protein. | Thioredoxin domain-containing protein. | 0.449 |
D8TRC4_VOLCA | D8UED0_VOLCA | D8TRC4 | D8UED0 | Thioredoxin domain-containing protein. | Uncharacterized protein. | 0.524 |
D8TRC4_VOLCA | D8UGW8_VOLCA | D8TRC4 | D8UGW8 | Thioredoxin domain-containing protein. | Thioredoxin domain-containing protein. | 0.501 |
D8TRC4_VOLCA | ero1 | D8TRC4 | D8THH0 | Thioredoxin domain-containing protein. | Endoplasmic reticulum oxidoreductin 1 family protein. | 0.488 |
D8TRC4_VOLCA | prx2 | D8TRC4 | D8UD42 | Thioredoxin domain-containing protein. | 2-cys peroxiredoxin, probably cytosolic. | 0.501 |
D8TRC4_VOLCA | prx4 | D8TRC4 | D8U4Q5 | Thioredoxin domain-containing protein. | Peroxiredoxin, type II. | 0.435 |
D8TRC4_VOLCA | prx5 | D8TRC4 | D8UCL3 | Thioredoxin domain-containing protein. | Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. | 0.435 |
D8U482_VOLCA | D8TRC4_VOLCA | D8U482 | D8TRC4 | Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | Thioredoxin domain-containing protein. | 0.462 |
D8U5K1_VOLCA | D8TRC4_VOLCA | D8U5K1 | D8TRC4 | Calreticulin. | Thioredoxin domain-containing protein. | 0.494 |
D8U5K1_VOLCA | D8UED0_VOLCA | D8U5K1 | D8UED0 | Calreticulin. | Uncharacterized protein. | 0.956 |
D8U5K1_VOLCA | ero1 | D8U5K1 | D8THH0 | Calreticulin. | Endoplasmic reticulum oxidoreductin 1 family protein. | 0.415 |
D8UAZ7_VOLCA | D8TRC4_VOLCA | D8UAZ7 | D8TRC4 | Thioredoxin domain-containing protein. | Thioredoxin domain-containing protein. | 0.449 |
D8UED0_VOLCA | D8TRC4_VOLCA | D8UED0 | D8TRC4 | Uncharacterized protein. | Thioredoxin domain-containing protein. | 0.524 |
D8UED0_VOLCA | D8U5K1_VOLCA | D8UED0 | D8U5K1 | Uncharacterized protein. | Calreticulin. | 0.956 |
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