STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8TS09_VOLCAHistidine kinase domain-containing protein. (212 aa)    
Predicted Functional Partners:
D8UBE7_VOLCA
GAF domain-containing protein.
 
  
  0.830
D8UJD2_VOLCA
HPt domain-containing protein.
   
 
 0.543
D8U893_VOLCA
PAS domain-containing protein.
 
  
  0.499
nitA
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
  
 0.465
D8TTX2_VOLCA
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
  
 0.465
D8TIF7_VOLCA
Ion_trans domain-containing protein.
    
 0.407
ogd3
2-oxoglutarate dehydrogenase, E2 component.
    
 0.407
D8TL92_VOLCA
Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
    
 0.407
D8TUP1_VOLCA
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
    
 0.407
ogd2
2-oxoglutarate dehydrogenase, E2 component.
    
 0.407
Your Current Organism:
Volvox carteri
NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar
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