STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8TVV4_VOLCAUncharacterized protein. (308 aa)    
Predicted Functional Partners:
D8U648_VOLCA
Uncharacterized protein.
   
 0.671
D8TPU4_VOLCA
Uncharacterized protein.
    
 0.580
D8UK41_VOLCA
Sortilin.
    
 0.530
D8UFG7_VOLCA
Uncharacterized protein.
    
 0.513
D8U493_VOLCA
Uncharacterized protein.
    
 0.495
D8TXG2_VOLCA
Uncharacterized protein.
  
 
  0.466
D8UAN0_VOLCA
Uncharacterized protein.
  
     0.465
D8U857_VOLCA
Uncharacterized protein.
  
     0.449
D8ULN5_VOLCA
Uncharacterized protein.
  
 
 0.420
D8UM55_VOLCA
Uncharacterized protein.
  
 
  0.417
Your Current Organism:
Volvox carteri
NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.