STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8TW55_VOLCAM20_dimer domain-containing protein. (436 aa)    
Predicted Functional Partners:
ags1
Argininosuccinate synthase.
  
 0.971
D8U582_VOLCA
Arginine biosynthesis bifunctional protein ArgJ, chloroplastic; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate.
   
 
 0.963
D8THT2_VOLCA
Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.962
D8TPH9_VOLCA
Uncharacterized protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
    
 0.955
D8TLA7_VOLCA
G domain-containing protein.
    
  0.902
D8U419_VOLCA
Semialdhyde_dh domain-containing protein.
  
 0.732
D8U7K7_VOLCA
Aldedh domain-containing protein.
     
 0.653
D8UIZ0_VOLCA
Uncharacterized protein.
    
 0.601
D8TY66_VOLCA
Uncharacterized protein.
    
 0.588
D8TR42_VOLCA
DHO_dh domain-containing protein.
  
 0.552
Your Current Organism:
Volvox carteri
NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.