STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8TX12_VOLCAUncharacterized protein. (640 aa)    
Predicted Functional Partners:
D8UMW7_VOLCA
AB hydrolase-1 domain-containing protein.
  
 
  0.688
D8TUH9_VOLCA
Uncharacterized protein.
   
 0.667
D8TJ26_VOLCA
Uncharacterized protein.
  
 0.666
D8TVG7_VOLCA
Uncharacterized protein.
  
 
 0.657
D8TWR6_VOLCA
MGS domain-containing protein.
  
 
 0.638
D8TLR9_VOLCA
AMPKBI domain-containing protein.
   
 0.632
D8UAH5_VOLCA
AMPK1_CBM domain-containing protein.
   
 0.632
D8TPY1_VOLCA
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.598
D8U5M8_VOLCA
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.525
apg6
Autophagy protein.
   
 
  0.523
Your Current Organism:
Volvox carteri
NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar
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