Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
D8TI09_VOLCA | D8TY83_VOLCA | D8TI09 | D8TY83 | Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family. | Uncharacterized protein. | 0.446 |
D8TI09_VOLCA | D8TYK0_VOLCA | D8TI09 | D8TYK0 | Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family. | Uncharacterized protein. | 0.950 |
D8TV38_VOLCA | D8TY83_VOLCA | D8TV38 | D8TY83 | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Uncharacterized protein. | 0.403 |
D8TV38_VOLCA | MED10 | D8TV38 | D8TIV6 | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Mediator of RNA polymerase II transcription subunit 10; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.992 |
D8TY83_VOLCA | D8TI09_VOLCA | D8TY83 | D8TI09 | Uncharacterized protein. | Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family. | 0.446 |
D8TY83_VOLCA | D8TV38_VOLCA | D8TY83 | D8TV38 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.403 |
D8TY83_VOLCA | D8TYK0_VOLCA | D8TY83 | D8TYK0 | Uncharacterized protein. | Uncharacterized protein. | 0.417 |
D8TY83_VOLCA | D8U1L7_VOLCA | D8TY83 | D8U1L7 | Uncharacterized protein. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.446 |
D8TY83_VOLCA | D8U4F4_VOLCA | D8TY83 | D8U4F4 | Uncharacterized protein. | Uncharacterized protein. | 0.513 |
D8TY83_VOLCA | D8UAZ2_VOLCA | D8TY83 | D8UAZ2 | Uncharacterized protein. | Uncharacterized protein. | 0.458 |
D8TY83_VOLCA | MED10 | D8TY83 | D8TIV6 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 10; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.411 |
D8TY83_VOLCA | acp1 | D8TY83 | D8U1A8 | Uncharacterized protein. | Acyl-carrier protein, probably mitochondrial. | 0.446 |
D8TYK0_VOLCA | D8TI09_VOLCA | D8TYK0 | D8TI09 | Uncharacterized protein. | Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family. | 0.950 |
D8TYK0_VOLCA | D8TY83_VOLCA | D8TYK0 | D8TY83 | Uncharacterized protein. | Uncharacterized protein. | 0.417 |
D8TYK0_VOLCA | D8U4F4_VOLCA | D8TYK0 | D8U4F4 | Uncharacterized protein. | Uncharacterized protein. | 0.642 |
D8U1L7_VOLCA | D8TY83_VOLCA | D8U1L7 | D8TY83 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Uncharacterized protein. | 0.446 |
D8U1L7_VOLCA | D8U4F4_VOLCA | D8U1L7 | D8U4F4 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Uncharacterized protein. | 0.944 |
D8U1L7_VOLCA | D8UAZ2_VOLCA | D8U1L7 | D8UAZ2 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Uncharacterized protein. | 0.944 |
D8U4F4_VOLCA | D8TY83_VOLCA | D8U4F4 | D8TY83 | Uncharacterized protein. | Uncharacterized protein. | 0.513 |
D8U4F4_VOLCA | D8TYK0_VOLCA | D8U4F4 | D8TYK0 | Uncharacterized protein. | Uncharacterized protein. | 0.642 |
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