STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8U0J4_VOLCAAmino_oxidase domain-containing protein. (518 aa)    
Predicted Functional Partners:
D8UDR0_VOLCA
Uncharacterized protein.
  
 
 0.840
D8U6I5_VOLCA
Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'.
  
  
 0.763
D8UHM8_VOLCA
FAD_binding_3 domain-containing protein.
 
 
 0.738
D8TK09_VOLCA
Uncharacterized protein.
  
 
 0.703
D8UF05_VOLCA
Uncharacterized protein.
  
 
 0.686
upf3
Magnesium protoporphyrin chelatase.
  
  
 0.683
D8TP57_VOLCA
Amino_oxidase domain-containing protein.
     
 0.663
D8TYU4_VOLCA
Uncharacterized protein.
     
 0.652
D8TQT2_VOLCA
Uncharacterized protein.
      
 0.648
chlM
Magnesium protoporphyrin IX S-adenosyl methionine O-methyl transferase chloroplast.
  
  
 0.640
Your Current Organism:
Volvox carteri
NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar
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