STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8U348_VOLCAUncharacterized protein. (103 aa)    
Predicted Functional Partners:
D8TIF3_VOLCA
Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family.
    
   0.870
D8TIP9_VOLCA
L51_S25_CI-B8 domain-containing protein.
    
   0.870
D8TKR1_VOLCA
Uncharacterized protein.
    
   0.870
mrpL17
Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
    
   0.870
mrpL30
Mitochondrial ribosomal protein L30; Belongs to the universal ribosomal protein uL30 family.
    
   0.870
D8TLX6_VOLCA
Uncharacterized protein.
    
   0.870
mrpL20
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
    
   0.870
D8TQR8_VOLCA
Uncharacterized protein.
    
   0.870
prpL6
Plastid/chloroplast ribosomal protein L6; Belongs to the universal ribosomal protein uL6 family.
    
   0.870
D8TWK5_VOLCA
KOW domain-containing protein; Belongs to the universal ribosomal protein uL24 family.
    
   0.870
Your Current Organism:
Volvox carteri
NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.