STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpl12Component of cytosolic 80S ribosome and 60S large subunit; Belongs to the universal ribosomal protein uL11 family. (166 aa)    
Predicted Functional Partners:
rpl21
Component of cytosolic 80S ribosome and 60S large subunit.
   
 0.999
rps8-2
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 
 0.999
rpl32
Component of cytosolic 80S ribosome and 60S large subunit.
   
 0.999
rpl31
Component of cytosolic 80S ribosome and 60S large subunit.
  
 0.999
rpl3
Component of cytosolic 80S ribosome and 60S large subunit; Belongs to the universal ribosomal protein uL3 family.
  
 0.999
rpl24
Component of cytosolic 80S ribosome and 60S large subunit.
   
 0.999
rpl18A
60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.
  
 
 0.999
rpl17
Component of cytosolic 80S ribosome and 60S large subunit; Belongs to the universal ribosomal protein uL22 family.
  
 0.999
rps26
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 
 0.999
rpl27
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
   
 0.999
Your Current Organism:
Volvox carteri
NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.