STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8U4F1_VOLCACytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c. (293 aa)    
Predicted Functional Partners:
D8TNU6_VOLCA
Uncharacterized protein.
   
 
 0.953
D8TZE5_VOLCA
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
     
 0.909
D8U027_VOLCA
Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.
  
  
 
0.904
D8TYU6_VOLCA
Uncharacterized protein.
     
  0.900
D8TZR1_VOLCA
Uncharacterized protein.
     
  0.900
cyt1
Ubiquinol:cytochrome c oxidoreductase cytochrome c1, mitochondrial.
   
 
 0.585
nuo5
NADH:ubiquinone oxidoreductase 24 kDa subunit.
   
  
 0.452
D8UEQ4_VOLCA
Exonuclease domain-containing protein.
      
 0.402
Your Current Organism:
Volvox carteri
NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.