STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8U4P4_VOLCARibosomal_TL5_C domain-containing protein. (299 aa)    
Predicted Functional Partners:
prpS16
Plastid/chloroplast ribosomal protein S16.
  
 0.975
mrpS9
Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
  
 0.973
mrpS12
Mitochondrial ribosomal protein S12.
   
 0.964
mrpL33
Mitochondrial ribosomal protein L33.
  
 
 0.964
D8TIF3_VOLCA
Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family.
   
 
 0.961
D8TH64_VOLCA
Uncharacterized protein.
  
 0.960
D8UI38_VOLCA
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
 0.957
mrpS14
Mitochondrial ribosomal protein S14.
   
 0.954
mrpL4
Mitochondrial ribosomal protein L4.
   
 0.952
D8U9A8_VOLCA
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
  
 0.950
Your Current Organism:
Volvox carteri
NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar
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