STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8U603_VOLCAGlycos_trans_3N domain-containing protein. (78 aa)    
Predicted Functional Partners:
D8TNL4_VOLCA
IGPS domain-containing protein.
  
 
 0.999
D8TNX8_VOLCA
PRAI domain-containing protein.
  
 
 0.999
D8TYB7_VOLCA
Glutamine amidotransferase type-1 domain-containing protein.
  
 
 0.999
D8U4B5_VOLCA
Uncharacterized protein; Belongs to the TrpA family.
  
 
 0.999
D8U5X6_VOLCA
Tryptophan synthase.
  
 
 0.999
D8TKF2_VOLCA
Uncharacterized protein.
  
 0.967
D8U7A5_VOLCA
Uncharacterized protein.
  
 0.967
D8U7A6_VOLCA
Chorismate_bind domain-containing protein.
  
 0.967
adc1
ADC synthase.
  
 0.964
D8UDZ0_VOLCA
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase.
    
 0.887
Your Current Organism:
Volvox carteri
NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.