STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8U622_VOLCAUBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (224 aa)    
Predicted Functional Partners:
D8UBG1_VOLCA
TPR_REGION domain-containing protein.
    
 0.994
D8TUD3_VOLCA
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.990
D8UJZ4_VOLCA
TPR_REGION domain-containing protein.
    
 0.987
D8TIW5_VOLCA
Uncharacterized protein.
    
 0.981
D8TP82_VOLCA
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
0.975
D8UGM3_VOLCA
TPR_REGION domain-containing protein.
    
 0.974
D8UF69_VOLCA
RING-type domain-containing protein.
   
 0.972
D8ULD9_VOLCA
ANAPC5 domain-containing protein.
    
 0.970
rpl40
Component of cytosolic 80S ribosome and 60S large subunit.
   
 0.914
rps27A
Ribosomal protein S27A component of cytosolic 80S ribosome and 40S small subunit.
    
 0.913
Your Current Organism:
Volvox carteri
NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.