STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8U6R8_VOLCAAminotran_5 domain-containing protein. (448 aa)    
Predicted Functional Partners:
D8TUL4_VOLCA
Molybdopterin molybdenumtransferase; Catalyzes two steps in the biosynthesis of the molybdenum cofactor. In the first step, molybdopterin is adenylated. Subsequently, molybdate is inserted into adenylated molybdopterin and AMP is released.
  
 
 0.944
D8TUM3_VOLCA
MOSC domain-containing protein.
  
  
 
0.907
sufD
Iron-sulfur cluster assembly protein.
  
 0.859
sufB
Iron-sulfur cluster assembly protein.
  
 0.859
D8UC33_VOLCA
Rhodanese domain-containing protein.
    
  0.692
D8TUI6_VOLCA
D-ser_dehydrat domain-containing protein.
    
  0.671
nitA
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
     
 0.669
D8TTX2_VOLCA
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
     
 0.669
D8TX78_VOLCA
Cytochrome b5 heme-binding domain-containing protein.
      
 0.649
D8TM62_VOLCA
Uncharacterized protein.
    
 0.636
Your Current Organism:
Volvox carteri
NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar
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