STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8U8H7_VOLCAUncharacterized protein. (527 aa)    
Predicted Functional Partners:
D8TX09_VOLCA
Helicase ATP-binding domain-containing protein.
    
 0.677
D8TW70_VOLCA
Uncharacterized protein.
    
 0.537
D8UJ12_VOLCA
Sm domain-containing protein.
    
 0.504
D8U382_VOLCA
Sm domain-containing protein.
    
  0.493
D8TM80_VOLCA
Small nuclear ribonucleoprotein G.
    
  0.486
D8TYN8_VOLCA
Small nuclear ribonucleoprotein Sm D2.
    
 0.478
D8U613_VOLCA
Uncharacterized protein.
   
 0.460
D8UDC0_VOLCA
DNA polymerase.
   
 0.460
D8TSI2_VOLCA
Uncharacterized protein.
   
 0.457
D8U6X2_VOLCA
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.420
Your Current Organism:
Volvox carteri
NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.