STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8U988_VOLCAUncharacterized protein. (627 aa)    
Predicted Functional Partners:
D8UHK9_VOLCA
TPT domain-containing protein.
   
  
 0.659
D8UB77_VOLCA
Uncharacterized protein.
      
 0.648
D8U4H1_VOLCA
Obg-like ATPase 1; Hydrolyzes ATP, and can also hydrolyze GTP with lower efficiency. Has lower affinity for GTP.
      
 0.556
D8TS90_VOLCA
Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
  
 0.521
D8TIY0_VOLCA
Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
      
 0.470
D8UB79_VOLCA
Uncharacterized protein.
   
  
 0.440
sbpA
Sedoheptulose-1,7-biphosphatase.
   
    0.438
D8U7H2_VOLCA
FAD-binding PCMH-type domain-containing protein.
     
 0.435
D8TJP7_VOLCA
Starch synthase, chloroplastic/amyloplastic; Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.
      
 0.405
D8U4E6_VOLCA
6-phosphogluconate dehydrogenase, decarboxylating; Belongs to the 6-phosphogluconate dehydrogenase family.
      
 0.403
Your Current Organism:
Volvox carteri
NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.