STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8UDE1_VOLCAAldolase_II domain-containing protein. (491 aa)    
Predicted Functional Partners:
D8U651_VOLCA
PNP_UDP_1 domain-containing protein.
      
 0.999
adi1
1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase; Catalyzes the formation of formate and 2-keto-4- methylthiobutyrate (KMTB) from 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene).
 
 0.999
eif2C
Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P). Belongs to the eIF-2B alpha/beta/delta subunits family. MtnA subfamily.
 
 
 0.998
D8TSQ6_VOLCA
APH domain-containing protein.
  
 
 0.985
D8TZG6_VOLCA
Uncharacterized protein.
  
 
 0.985
D8TY54_VOLCA
Uncharacterized protein.
  
 
 0.947
D8TN53_VOLCA
Uncharacterized protein.
   
  
 0.923
A0A125YL87
Uncharacterized protein.
  
 
 0.914
D8U4Q1_VOLCA
TRANSKETOLASE_1 domain-containing protein.
  
 
 0.886
D8UE88_VOLCA
TRANSKETOLASE_1 domain-containing protein.
  
 
 0.886
Your Current Organism:
Volvox carteri
NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.