STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdki1Cyclin dependent kinase; Belongs to the protein kinase superfamily. (383 aa)    
Predicted Functional Partners:
D8U0Y2_VOLCA
CYCLIN domain-containing protein; Belongs to the cyclin family.
    
 0.931
D8U1A9_VOLCA
MAT1 domain-containing protein.
   
 0.931
D8U542_VOLCA
Uncharacterized protein.
      
 0.928
D8TTF2_VOLCA
Helicase ATP-binding domain-containing protein.
    
 0.925
D8TK73_VOLCA
Uncharacterized protein.
    
 0.924
D8TKQ5_VOLCA
General transcription factor IIH subunit.
   
 0.914
D8TU17_VOLCA
BSD domain-containing protein.
   
 0.913
D8TPA8_VOLCA
TFA2_Winged_2 domain-containing protein.
   
 0.910
D8TU12_VOLCA
Uncharacterized protein.
    
 0.890
D8U6D7_VOLCA
RPOL4c domain-containing protein.
   
 0.835
Your Current Organism:
Volvox carteri
NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.