STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8UEB8_VOLCAUncharacterized protein. (729 aa)    
Predicted Functional Partners:
D8TI09_VOLCA
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 0.982
D8TZQ3_VOLCA
Uncharacterized protein.
   
 
 0.917
D8U9J3_VOLCA
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
   
 0.884
D8UL83_VOLCA
Uncharacterized protein.
   
 0.884
D8TYK0_VOLCA
Uncharacterized protein.
   
 0.882
D8TK09_VOLCA
Uncharacterized protein.
  
 
 0.804
D8UDR0_VOLCA
Uncharacterized protein.
  
 
 0.804
D8TWH4_VOLCA
SC5D, C-5 sterol desaturase; Belongs to the sterol desaturase family.
   
 0.784
D8TW41_VOLCA
SE domain-containing protein.
   
 0.776
D8U2E4_VOLCA
FAD_binding_3 domain-containing protein.
   
 0.776
Your Current Organism:
Volvox carteri
NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.