STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8UEP5_VOLCAUncharacterized protein. (315 aa)    
Predicted Functional Partners:
D8TP35_VOLCA
KH domain-containing protein.
   
 0.995
D8TSB6_VOLCA
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
 
 0.951
D8TWP6_VOLCA
WD_REPEATS_REGION domain-containing protein.
   
 
 0.925
D8U8A8_VOLCA
Sas10 domain-containing protein.
   
 
 0.892
D8TI14_VOLCA
Uncharacterized protein.
   
 
 0.888
D8U8D8_VOLCA
Uncharacterized protein.
   
 
 0.886
D8UBE0_VOLCA
S4 RNA-binding domain-containing protein.
   
 0.878
D8TNC3_VOLCA
WD_REPEATS_REGION domain-containing protein.
   
 
 0.871
D8TJ79_VOLCA
Kri1_C domain-containing protein.
   
 
 0.846
D8TQJ3_VOLCA
RRM domain-containing protein.
   
    0.844
Your Current Organism:
Volvox carteri
NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar
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