STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8UFF7_VOLCAUpf2 domain-containing protein. (161 aa)    
Predicted Functional Partners:
D8TJ19_VOLCA
Uncharacterized protein.
   
 0.832
D8TUF6_VOLCA
AAA_11 domain-containing protein.
   
 0.750
D8U8C0_VOLCA
Uncharacterized protein.
   
 0.750
D8TSD2_VOLCA
PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family.
   
 
 0.746
D8TIQ1_VOLCA
Smg4_UPF3 domain-containing protein.
   
 0.744
D8U1T3_VOLCA
Hybrid-cluster protein.
   
 0.744
D8TI93_VOLCA
RRM domain-containing protein.
    
 0.711
D8U4E5_VOLCA
RRM domain-containing protein.
    
 0.649
D8UI06_VOLCA
RRM domain-containing protein.
    
 0.649
D8U296_VOLCA
PWI domain-containing protein.
    
 
 0.640
Your Current Organism:
Volvox carteri
NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.