STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8UFI8_VOLCAAPH domain-containing protein. (687 aa)    
Predicted Functional Partners:
D8UDE1_VOLCA
Aldolase_II domain-containing protein.
  
  
 0.741
D8TLV0_VOLCA
Aspartokinase; Belongs to the aspartokinase family.
  
 
 0.586
adi1
1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase; Catalyzes the formation of formate and 2-keto-4- methylthiobutyrate (KMTB) from 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene).
  
 
 0.562
D8U1V8_VOLCA
4-hydroxyphenylpyruvate dioxygenase.
   
 
 0.556
D8U7K7_VOLCA
Aldedh domain-containing protein.
  
  
 0.542
D8UIZ0_VOLCA
Uncharacterized protein.
  
 0.541
agd1
Arogenate/prephenate dehydrogenase.
    
 0.523
ahd1
Bifunctional aspartate kinase/homoserine dehydrogenase.
  
 0.518
D8UJG2_VOLCA
Homoserine dehydrogenase.
  
 0.518
D8U419_VOLCA
Semialdhyde_dh domain-containing protein.
    
 0.507
Your Current Organism:
Volvox carteri
NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar
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