STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8UFL4_VOLCAUncharacterized protein. (327 aa)    
Predicted Functional Partners:
D8TTE1_VOLCA
TGc domain-containing protein.
    
 0.663
rabF
RabF/Rab5.
    
 0.601
D8UKW3_VOLCA
Uncharacterized protein.
    
 0.601
D8TKE5_VOLCA
Uncharacterized protein.
  
 
  0.502
D8U1M9_VOLCA
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 
 0.475
ift81
Uncharacterized protein ift81.
    
 0.452
D8TH40_VOLCA
Uncharacterized protein.
    
 0.425
rpl40
Component of cytosolic 80S ribosome and 60S large subunit.
    
  0.420
D8THQ8_VOLCA
Kar3 member kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.410
eif2Bb
Eukaryotic translation initiation factor 2B beta; Belongs to the eIF-2B alpha/beta/delta subunits family.
    
   0.404
Your Current Organism:
Volvox carteri
NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar
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