STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8UG51_VOLCAUncharacterized protein. (624 aa)    
Predicted Functional Partners:
D8UHE9_VOLCA
Uncharacterized protein.
    
 0.649
D8UD04_VOLCA
USP domain-containing protein; Belongs to the peptidase C19 family.
    
 0.567
D8TJ49_VOLCA
ATM/ATR-like kinase; Belongs to the PI3/PI4-kinase family.
    
 0.546
D8TM96_VOLCA
TFIID_20kDa domain-containing protein.
    
 0.508
D8U7C9_VOLCA
Uncharacterized protein.
    
  0.492
D8UFK9_VOLCA
TAF domain-containing protein.
    
 0.486
D8TZ69_VOLCA
Uncharacterized protein.
    
  0.481
Your Current Organism:
Volvox carteri
NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.