STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8UIE2_VOLCAProtein kinase domain-containing protein. (1323 aa)    
Predicted Functional Partners:
D8UDL1_VOLCA
Uncharacterized protein.
    
 0.918
use1
Qc-SNARE, USE1 family.
    
 0.893
syp8
Uncharacterized protein syp8.
    
 0.892
D8UB08_VOLCA
Uncharacterized protein.
    
 0.876
sec22
R-SNARE, Sec22-family; Belongs to the synaptobrevin family.
   
 0.875
D8UBU4_VOLCA
Uncharacterized protein.
   
 0.848
D8TUC6_VOLCA
Uncharacterized protein; Belongs to the AAA ATPase family.
    
 0.697
D8TKB5_VOLCA
Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
     
 0.636
snapA1
Uncharacterized protein snapA1.
    
 0.602
D8UAE2_VOLCA
WD_REPEATS_REGION domain-containing protein.
    
 0.602
Your Current Organism:
Volvox carteri
NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar
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