STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8UIX2_VOLCARRM domain-containing protein. (134 aa)    
Predicted Functional Partners:
D8TPW6_VOLCA
FHA domain-containing protein.
   
 0.989
D8U511_VOLCA
Uncharacterized protein.
   
 0.965
D8TPT0_VOLCA
Uncharacterized protein.
   
 0.964
D8TW30_VOLCA
Uncharacterized protein.
    
 
 0.960
D8UDZ8_VOLCA
SF3b1 domain-containing protein.
    
 
 0.957
D8TNR4_VOLCA
PSP domain-containing protein.
    
 
 0.950
D8UBS5_VOLCA
Uncharacterized protein.
    
 
 0.950
D8UHM3_VOLCA
SKIP_SNW domain-containing protein.
    
 
 0.944
D8U6L2_VOLCA
Peptidase_S8 domain-containing protein.
    
 
 0.942
D8TI18_VOLCA
MI domain-containing protein.
   
 
 0.934
Your Current Organism:
Volvox carteri
NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.