STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHGG_10690Aspartate aminotransferase. (228 aa)    
Predicted Functional Partners:
CHGG_05041
Aspartate aminotransferase.
  
0.951
CHGG_05172
Malate dehydrogenase.
   
 0.948
CHGG_05629
Malate dehydrogenase.
   
 0.948
CHGG_09186
Aminotran_1_2 domain-containing protein.
   
 
 0.936
CHGG_06880
Ldh_1_N domain-containing protein.
   
 0.929
CHGG_01357
Aminotran_1_2 domain-containing protein.
   
 
 0.919
CHGG_07713
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 0.918
CHGG_06224
Arg-6 protein, mitochondrial; In the N-terminal section; belongs to the acetylglutamate kinase family.
     
 0.917
CHGG_01641
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
   
 
 0.917
CHGG_07909
4-hydroxyphenylpyruvate dioxygenase.
  
 
 0.916
Your Current Organism:
Chaetomium globosum
NCBI taxonomy Id: 306901
Other names: C. globosum CBS 148.51, Chaetomium globosum CBS 148.51
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.