STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHGG_06199Uncharacterized protein. (367 aa)    
Predicted Functional Partners:
CHGG_06847
SGF29 C-terminal domain-containing protein.
    
 
 0.989
CHGG_04242
Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation.
    
 
 0.967
CHGG_03196
SCA7 domain-containing protein.
    
 
 0.901
CHGG_02663
SCA7 domain-containing protein.
    
 
 0.901
CHGG_05484
ArAE_2_N domain-containing protein.
    
 
 0.872
CHGG_00529
Uncharacterized protein.
    
 
 0.872
CHGG_09623
TFIID_20kDa domain-containing protein.
    
 
 0.824
CHGG_07665
TAF domain-containing protein.
    
 
 0.823
CHGG_01753
Uncharacterized protein.
    
 
 0.815
CHGG_08285
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
 
 0.813
Your Current Organism:
Chaetomium globosum
NCBI taxonomy Id: 306901
Other names: C. globosum CBS 148.51, Chaetomium globosum CBS 148.51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.