STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRH4ATP-dependent RNA helicase MRH4, mitochondrial; ATP-binding RNA helicase involved in mitochondrial RNA metabolism. Required for maintenance of mitochondrial DNA (By similarity); Belongs to the DEAD box helicase family. MRH4 subfamily. (576 aa)    
Predicted Functional Partners:
CHGG_00528
TPR_REGION domain-containing protein.
    
 0.711
CHGG_06743
Uncharacterized protein.
  
 
 0.696
CHGG_01389
Tr-type G domain-containing protein.
   
 0.686
CHGG_04974
Uncharacterized protein.
  
 
 0.674
CHGG_03863
Uncharacterized protein.
    
 0.640
CHGG_04693
Uncharacterized protein; Belongs to the DEAD box helicase family.
  
 
 0.631
CHGG_10255
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 
 0.598
CHGG_01616
ATP synthase subunit gamma.
   
 
 0.588
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.585
CHGG_09127
Uncharacterized protein; Belongs to the GST superfamily.
  
   0.578
Your Current Organism:
Chaetomium globosum
NCBI taxonomy Id: 306901
Other names: C. globosum CBS 148.51, Chaetomium globosum CBS 148.51
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