NMA111 protein (Chaetomium globosum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

NMA111

Pro-apoptotic serine protease NMA111; Nuclear serine protease which mediates apoptosis. Belongs to the peptidase S1C family. (1030 aa)

Predicted Functional Partners:

CHGG_08079

0.943

CHGG_07477

0.786

CHGG_09826

0.710

CHGG_06330

0.691

CHGG_03817

0.666

CHGG_01634

0.651

CHGG_10687

0.626

CHGG_01208

0.622

CHGG_04657

0.618

CHGG_05734

0.598

Your Current Organism:

Chaetomium globosum

NCBI taxonomy Id: 306901
Other names: C. globosum CBS 148.51, Chaetomium globosum CBS 148.51

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CHGG_01208	CHGG_03817	Q2HEZ6	Q2H329	UBX domain-containing protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.785
CHGG_01208	CHGG_04657	Q2HEZ6	Q2H0N9	UBX domain-containing protein.	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.633
CHGG_01208	NMA111	Q2HEZ6	Q2H334	UBX domain-containing protein.	Pro-apoptotic serine protease NMA111; Nuclear serine protease which mediates apoptosis. Belongs to the peptidase S1C family.	0.622
CHGG_01634	CHGG_04657	Q2HDS0	Q2H0N9	RPN13_C domain-containing protein.	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.996
CHGG_01634	CHGG_06330	Q2HDS0	Q2H4T5	RPN13_C domain-containing protein.	PCI domain-containing protein.	0.993
CHGG_01634	CHGG_09826	Q2HDS0	Q2GQC8	RPN13_C domain-containing protein.	26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.998
CHGG_01634	NMA111	Q2HDS0	Q2H334	RPN13_C domain-containing protein.	Pro-apoptotic serine protease NMA111; Nuclear serine protease which mediates apoptosis. Belongs to the peptidase S1C family.	0.651
CHGG_03817	CHGG_01208	Q2H329	Q2HEZ6	CULLIN_2 domain-containing protein; Belongs to the cullin family.	UBX domain-containing protein.	0.785
CHGG_03817	CHGG_04657	Q2H329	Q2H0N9	CULLIN_2 domain-containing protein; Belongs to the cullin family.	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.605
CHGG_03817	CHGG_06330	Q2H329	Q2H4T5	CULLIN_2 domain-containing protein; Belongs to the cullin family.	PCI domain-containing protein.	0.669
CHGG_03817	CHGG_07477	Q2H329	Q2GX27	CULLIN_2 domain-containing protein; Belongs to the cullin family.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.647
CHGG_03817	CHGG_09826	Q2H329	Q2GQC8	CULLIN_2 domain-containing protein; Belongs to the cullin family.	26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.657
CHGG_03817	NMA111	Q2H329	Q2H334	CULLIN_2 domain-containing protein; Belongs to the cullin family.	Pro-apoptotic serine protease NMA111; Nuclear serine protease which mediates apoptosis. Belongs to the peptidase S1C family.	0.666
CHGG_04657	CHGG_01208	Q2H0N9	Q2HEZ6	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	UBX domain-containing protein.	0.633
CHGG_04657	CHGG_01634	Q2H0N9	Q2HDS0	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	RPN13_C domain-containing protein.	0.996
CHGG_04657	CHGG_03817	Q2H0N9	Q2H329	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.605
CHGG_04657	CHGG_06330	Q2H0N9	Q2H4T5	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	PCI domain-containing protein.	0.999
CHGG_04657	CHGG_07477	Q2H0N9	Q2GX27	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.601
CHGG_04657	CHGG_09826	Q2H0N9	Q2GQC8	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.999
CHGG_04657	NMA111	Q2H0N9	Q2H334	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	Pro-apoptotic serine protease NMA111; Nuclear serine protease which mediates apoptosis. Belongs to the peptidase S1C family.	0.618