STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCP1Protein BCP1; Involved in nuclear export, actin cytoskeleton organization and vesicular transport; Belongs to the BCP1 family. (291 aa)    
Predicted Functional Partners:
CHGG_02088
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
    
 
 0.896
CHGG_00927
Brix domain-containing protein.
   
  
 0.801
CHGG_10382
RRM domain-containing protein.
   
    0.789
CHGG_02571
Uncharacterized protein.
   
    0.757
CHGG_03518
Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.
    
 
 0.712
CHGG_03224
RL10P_insert domain-containing protein.
   
    0.672
CHGG_07067
Brix domain-containing protein.
   
    0.647
YTM1
Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
   0.646
CHGG_00813
CP-type G domain-containing protein.
   
   0.628
CHGG_08123
HIT-type domain-containing protein.
   
  
 0.627
Your Current Organism:
Chaetomium globosum
NCBI taxonomy Id: 306901
Other names: C. globosum CBS 148.51, Chaetomium globosum CBS 148.51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.