STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLUG_01681Uncharacterized protein; Belongs to the MT-A70-like family. (362 aa)    
Predicted Functional Partners:
CLUG_03093
Uncharacterized protein; Belongs to the MT-A70-like family.
  
 
 0.999
CLUG_05202
Uncharacterized protein.
  
    0.793
CLUG_04795
YTH domain-containing protein.
  
   
 0.709
CLUG_03627
S1 motif domain-containing protein.
   
 
  0.607
CLUG_00875
RPOLD domain-containing protein.
   
 
 0.596
CLUG_02165
SH3 domain-containing protein.
   
 
 0.596
CLUG_05815
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
   
 
  0.596
CLUG_03164
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
   
 
  0.595
CLUG_05175
Uncharacterized protein.
   
 
  0.591
CLUG_00492
Nuclear cap-binding protein subunit 2.
   
 
  0.556
Your Current Organism:
Clavispora lusitaniae
NCBI taxonomy Id: 306902
Other names: C. lusitaniae ATCC 42720, Candida lusitaniae ATCC 42720, Clavispora lusitaniae ATCC 42720
Server load: low (12%) [HD]