STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLUG_02620Uncharacterized protein. (499 aa)    
Predicted Functional Partners:
CLUG_02712
WD_REPEATS_REGION domain-containing protein.
   
 0.996
CLUG_00963
Uncharacterized protein.
   
 0.983
CLUG_03836
Protein kinase domain-containing protein.
    
 0.978
CLUG_03892
Protein kinase domain-containing protein.
    
 0.913
CLUG_01930
RIO domain-containing protein.
    
 
 0.901
CLUG_01883
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
     
 0.900
CLUG_01406
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.895
CLUG_01413
Negative regulator of the PHO system; Belongs to the protein kinase superfamily.
   
 0.699
CLUG_05341
Cell division control protein 28.
   
 0.699
CLUG_00002
Uncharacterized protein; Belongs to the actin family.
   
 0.687
Your Current Organism:
Clavispora lusitaniae
NCBI taxonomy Id: 306902
Other names: C. lusitaniae ATCC 42720, Candida lusitaniae ATCC 42720, Clavispora lusitaniae ATCC 42720
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.