STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLUG_04815Uncharacterized protein. (497 aa)    
Predicted Functional Partners:
CLUG_04817
Uncharacterized protein.
 
  
  0.992
CLUG_02558
WD_REPEATS_REGION domain-containing protein.
   
 
 0.801
CLUG_02572
RIX1 domain-containing protein.
   
 0.727
YTM1
Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.693
CLUG_01051
CP-type G domain-containing protein.
   
 
 0.690
CLUG_02023
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.682
CLUG_02636
C2H2-type domain-containing protein.
   
 
 0.634
CLUG_03717
Ipi1_N domain-containing protein.
    
 
 0.612
CLUG_04048
Uncharacterized protein.
   
 
 0.605
CLUG_00185
WD_REPEATS_REGION domain-containing protein.
   
 0.592
Your Current Organism:
Clavispora lusitaniae
NCBI taxonomy Id: 306902
Other names: C. lusitaniae ATCC 42720, Candida lusitaniae ATCC 42720, Clavispora lusitaniae ATCC 42720
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.