STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOP9Nucleolar protein 9; RNA-binding nucleolar protein required for pre-rRNA processing. Involved in production of 18S rRNA and assembly of small ribosomal subunit (By similarity); Belongs to the NOP9 family. (715 aa)    
Predicted Functional Partners:
CLUG_00349
Sas10 domain-containing protein.
   
   0.969
CLUG_03264
Uncharacterized protein.
   
 
 0.873
CLUG_00761
Nop domain-containing protein.
   
   0.839
CLUG_02638
AATF-Che1 domain-containing protein.
   
 
 0.838
CLUG_02225
Uncharacterized protein.
   
 
 0.823
CLUG_03781
PUM-HD domain-containing protein.
   
  
 0.810
CLUG_03917
Uncharacterized protein.
   
 
 0.809
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
   0.808
CLUG_04048
Uncharacterized protein.
   
   0.803
CLUG_00910
U3 small nucleolar RNA-associated protein 22.
   
 
 0.799
Your Current Organism:
Clavispora lusitaniae
NCBI taxonomy Id: 306902
Other names: C. lusitaniae ATCC 42720, Candida lusitaniae ATCC 42720, Clavispora lusitaniae ATCC 42720
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