Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CLUG_00349 | CLUG_00761 | C4XWM6 | C4XXT9 | Sas10 domain-containing protein. | Nop domain-containing protein. | 0.993 |
CLUG_00349 | CLUG_00910 | C4XWM6 | C4XY87 | Sas10 domain-containing protein. | U3 small nucleolar RNA-associated protein 22. | 0.996 |
CLUG_00349 | CLUG_02225 | C4XWM6 | C4Y1Z3 | Sas10 domain-containing protein. | Uncharacterized protein. | 0.478 |
CLUG_00349 | CLUG_02638 | C4XWM6 | C4Y4R6 | Sas10 domain-containing protein. | AATF-Che1 domain-containing protein. | 0.993 |
CLUG_00349 | CLUG_03264 | C4XWM6 | C4Y530 | Sas10 domain-containing protein. | Uncharacterized protein. | 0.998 |
CLUG_00349 | CLUG_03781 | C4XWM6 | C4Y6J8 | Sas10 domain-containing protein. | PUM-HD domain-containing protein. | 0.778 |
CLUG_00349 | CLUG_03917 | C4XWM6 | C4Y6Y3 | Sas10 domain-containing protein. | Uncharacterized protein. | 0.664 |
CLUG_00349 | ERB1 | C4XWM6 | C4Y4B6 | Sas10 domain-containing protein. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.638 |
CLUG_00349 | NOP9 | C4XWM6 | C4Y3N8 | Sas10 domain-containing protein. | Nucleolar protein 9; RNA-binding nucleolar protein required for pre-rRNA processing. Involved in production of 18S rRNA and assembly of small ribosomal subunit (By similarity); Belongs to the NOP9 family. | 0.969 |
CLUG_00761 | CLUG_00349 | C4XXT9 | C4XWM6 | Nop domain-containing protein. | Sas10 domain-containing protein. | 0.993 |
CLUG_00761 | CLUG_00910 | C4XXT9 | C4XY87 | Nop domain-containing protein. | U3 small nucleolar RNA-associated protein 22. | 0.996 |
CLUG_00761 | CLUG_02225 | C4XXT9 | C4Y1Z3 | Nop domain-containing protein. | Uncharacterized protein. | 0.670 |
CLUG_00761 | CLUG_02638 | C4XXT9 | C4Y4R6 | Nop domain-containing protein. | AATF-Che1 domain-containing protein. | 0.995 |
CLUG_00761 | CLUG_03264 | C4XXT9 | C4Y530 | Nop domain-containing protein. | Uncharacterized protein. | 0.995 |
CLUG_00761 | CLUG_03781 | C4XXT9 | C4Y6J8 | Nop domain-containing protein. | PUM-HD domain-containing protein. | 0.956 |
CLUG_00761 | CLUG_03917 | C4XXT9 | C4Y6Y3 | Nop domain-containing protein. | Uncharacterized protein. | 0.864 |
CLUG_00761 | CLUG_04048 | C4XXT9 | C4Y7B4 | Nop domain-containing protein. | Uncharacterized protein. | 0.770 |
CLUG_00761 | ERB1 | C4XXT9 | C4Y4B6 | Nop domain-containing protein. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.960 |
CLUG_00761 | NOP9 | C4XXT9 | C4Y3N8 | Nop domain-containing protein. | Nucleolar protein 9; RNA-binding nucleolar protein required for pre-rRNA processing. Involved in production of 18S rRNA and assembly of small ribosomal subunit (By similarity); Belongs to the NOP9 family. | 0.839 |
CLUG_00910 | CLUG_00349 | C4XY87 | C4XWM6 | U3 small nucleolar RNA-associated protein 22. | Sas10 domain-containing protein. | 0.996 |
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