STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBV25527.1Hypothetical protein. (153 aa)    
Predicted Functional Partners:
SBV25528.1
Hypothetical protein.
       0.780
SBV25529.1
Nucleotide-binding universal stress protein, UspA family.
       0.559
SBV29446.1
Methyltransferase domain-containing protein.
  
     0.537
SBV25637.1
Hypothetical protein.
  
     0.488
SBV29783.1
Hypothetical protein.
  
     0.460
SBV30714.1
Protein of unknown function.
  
     0.444
SBV26235.1
Uncharacterized conserved protein, DUF2267 family.
  
     0.431
SBV24657.1
Uncharacterized conserved protein, DUF2267 family; Manually curated.
  
     0.425
SBV27470.1
ADP-ribosylglycohydrolase.
  
     0.425
SBV27459.1
PH domain-containing protein.
  
     0.423
Your Current Organism:
Micromonospora krabiensis
NCBI taxonomy Id: 307121
Other names: DSM 45344, JCM 12869, M. krabiensis, Micromonospora krabiensis Jongrungruangchok et al. 2008, PCU 268, PCU:268, strain MA-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.