STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBV26178.1Glycosyltransferase involved in cell wall bisynthesis. (385 aa)    
Predicted Functional Partners:
SBV25441.1
Glycogen debranching enzyme (alpha-1,6-glucosidase); Non-canonical start codon; manually curated.
  
    0.749
SBV26228.1
Glycogen debranching enzyme (alpha-1,6-glucosidase).
  
    0.749
SBV25140.1
Glycogen debranching enzyme (alpha-1,6-glucosidase).
  
    0.748
SBV25182.1
Glycogen debranching enzyme (alpha-1,6-glucosidase).
  
    0.747
SBV25389.1
Glycogen debranching enzyme (alpha-1,6-glucosidase).
  
    0.747
SBV29359.1
Glycogen debranching enzyme (alpha-1,6-glucosidase).
  
    0.747
SBV25899.1
Glycogen debranching enzyme (alpha-1,6-glucosidase).
  
    0.745
SBV26875.1
Glycogen debranching enzyme (alpha-1,6-glucosidase).
  
    0.744
SBV30016.1
Glycogen debranching enzyme (alpha-1,6-glucosidase).
  
    0.744
SBV26175.1
Threonine dehydrogenase.
 
    0.722
Your Current Organism:
Micromonospora krabiensis
NCBI taxonomy Id: 307121
Other names: DSM 45344, JCM 12869, M. krabiensis, Micromonospora krabiensis Jongrungruangchok et al. 2008, PCU 268, PCU:268, strain MA-2
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