STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBV26673.1Signal transduction histidine kinase. (426 aa)    
Predicted Functional Partners:
SBV26674.1
Two component transcriptional regulator, LuxR family.
 
  0.961
SBV26676.1
ABC-2 type transport system permease protein.
 
     0.906
SBV26675.1
ABC-2 type transport system ATP-binding protein.
 
     0.878
SBV26032.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.822
SBV27688.1
Two component transcriptional regulator, LuxR family.
  
  0.822
SBV30758.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.818
SBV25113.1
Two component transcriptional regulator, LuxR family.
  
  0.809
SBV24817.1
Two component transcriptional regulator, LuxR family.
  
  0.808
SBV26105.1
Two component transcriptional regulator, LuxR family.
  
  0.807
SBV25567.1
Two component transcriptional regulator, LuxR family.
  
  0.805
Your Current Organism:
Micromonospora krabiensis
NCBI taxonomy Id: 307121
Other names: DSM 45344, JCM 12869, M. krabiensis, Micromonospora krabiensis Jongrungruangchok et al. 2008, PCU 268, PCU:268, strain MA-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.