STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBV26707.1beta-N-acetylhexosaminidase. (501 aa)    
Predicted Functional Partners:
SBV30261.1
CubicO group peptidase, beta-lactamase class C family.
 
 
  0.942
SBV26978.1
CubicO group peptidase, beta-lactamase class C family.
 
 
  0.923
SBV30300.1
beta-N-acetylhexosaminidase.
  
  
 
0.900
SBV27497.1
beta-N-acetylhexosaminidase.
  
  
 
0.883
SBV30493.1
Chitinase family 18; Belongs to the glycosyl hydrolase 18 family.
   
 
 0.841
SBV25930.1
Chitinase; Belongs to the glycosyl hydrolase 18 family.
   
 
  0.833
SBV25673.1
Chitinase, GH18 family; Belongs to the glycosyl hydrolase 18 family.
   
 
  0.792
SBV26708.1
Hypothetical protein.
       0.773
SBV25574.1
Hexosaminidase.
    
 0.712
SBV30209.1
Hexosaminidase.
    
 0.712
Your Current Organism:
Micromonospora krabiensis
NCBI taxonomy Id: 307121
Other names: DSM 45344, JCM 12869, M. krabiensis, Micromonospora krabiensis Jongrungruangchok et al. 2008, PCU 268, PCU:268, strain MA-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.