STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBV26954.1cation:H+ antiporter. (346 aa)    
Predicted Functional Partners:
SBV26955.1
Uncharacterized membrane protein YccF, DUF307 family.
       0.610
SBV26953.1
Hypothetical protein.
       0.507
SBV28869.1
ATPase, P-type (transporting), HAD superfamily, subfamily IC.
 
 
 0.497
SBV29141.1
Arsenite efflux ATP-binding protein ArsA (TC 3.A.4.1.1).
   
   0.440
SBV29142.1
Arsenite efflux ATP-binding protein ArsA (TC 3.A.4.1.1).
   
   0.440
Your Current Organism:
Micromonospora krabiensis
NCBI taxonomy Id: 307121
Other names: DSM 45344, JCM 12869, M. krabiensis, Micromonospora krabiensis Jongrungruangchok et al. 2008, PCU 268, PCU:268, strain MA-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.